Question

Looking databases for experimentaly validated miRNA-target interaction

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9.7 years ago

jack ▴ 960

Hi,

I'm looking rich databses for experimentally validated miRNA-target interactions for human.Basically I need to have the informations of experimentaly validated miRNA-transcript interactions.

Would you please give some recommendations?

next-gen genome RNA-Seq Assembly • 4.3k views

ADD COMMENT • link updated 2.3 years ago by Ram 43k • written 9.7 years ago by jack ▴ 960

Ram · Answer 1 · 2014-08-19

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9.7 years ago

lkmklsmn ▴ 970

Check out this website

It contains microRNA-target interactions from 108 CLIP-Seq datasets.

ADD COMMENT • link updated 2.4 years ago by Ram 43k • written 9.7 years ago by lkmklsmn ▴ 970

score 3 · Answer 2 · 2014-08-19

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9.7 years ago

B. Arman Aksoy ★ 1.2k

miRTarBase is yet another great resource for such data.

ADD COMMENT • link 9.7 years ago by B. Arman Aksoy ★ 1.2k

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The best, it is the only one updated to date.

ADD REPLY • link 7.2 years ago by Buffo ★ 2.4k