Question: Interaction among the proteins and interaction with central protein
0
gravatar for Ammu
5.3 years ago by
Ammu50
Sri Lanka
Ammu50 wrote:

I am using Cytoscape to view the interaction. here, I only observed interaction with central protein. Is there anyway that I can get also interaction among the proteins and interaction with central protein? 

protein interaction • 1.2k views
ADD COMMENTlink modified 5.3 years ago by russhh5.0k • written 5.3 years ago by Ammu50

where did your data come from?

ADD REPLYlink written 5.3 years ago by russhh5.0k

@russ_hyde  Importing from Biogrid.  

ADD REPLYlink written 5.3 years ago by Ammu50

Yes, but whiat kind of data is it?

Is it SILAC or Y2H or Y2H-seq or etc etc.?

ADD REPLYlink written 5.3 years ago by Manvendra Singh2.1k
1
gravatar for russhh
5.3 years ago by
russhh5.0k
UK, U. Glasgow
russhh5.0k wrote:

You could just import all of the biogrid data for your species, pick your first protein, select first neighbours and then make a new network from the selected nodes

ADD COMMENTlink written 5.3 years ago by russhh5.0k
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