I am analysing SNPs and INDELs in several prokaryotic genomes of the same strain. My goal is to compare them with a reference genome . I would like to learn how to plot the SNPs in a circular plot. It means, that in one plot I can have my reference strain (in the inside for example) and then the other genomes could be in circules around it, showing the SNPs.
Is there a easy and free software to do it??
Thank you for the help!!