Question: GSE43100 Illumina BeadArray Supplementary Data
1
gravatar for lm4x.m4xl
4.5 years ago by
lm4x.m4xl10
Canada
lm4x.m4xl10 wrote:

Hi, 

I'm having some extreme difficulty in loading the supplementary data files from here: http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE43100 in to R.

I can get the files like so:

getGEOSuppFiles('GSE43100')

But now I want to read them in to R in a way that allows me to take the data and turn it into an object (ExpressionSet?) that I can perform the typical pre-processing steps on (QA, Background Adjustment, Normalization, etc.). Is this possible and how would I do it, I've been spending hours googling this with no luck.

Thanks,

Max H.

 

beadarray supplementary geo • 1.0k views
ADD COMMENTlink modified 4.3 years ago by Biostar ♦♦ 20 • written 4.5 years ago by lm4x.m4xl10
What is the difficulty? Importing the data so that you can do the analysis and/or getting the supp data?
ADD REPLYlink modified 4.3 years ago • written 4.3 years ago by Irsan6.8k
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