Question: Two questions about plotting a venn diagram!
gravatar for Parham
4.6 years ago by
Parham1.4k wrote:


Can one plot a venn diagram in R, showing names of the objects instead of the numbers of how many are in each section?

My second question is can I plot two data sets in one venn diagram? Like to show the up and down regulated genes in one diagram! 


venn.diagram • 1.9k views
ADD COMMENTlink written 4.6 years ago by Parham1.4k

You can probably do the first part in R, but it's going to take quite a bit of manual intervention on your part, I suspect. I don't know of a package that will do that.

For the second part, I think the limma venn diagram will do that as an option... Take a look at this or the manual Limma Venn Diagram


ADD REPLYlink written 4.6 years ago by Madelaine Gogol5.1k

Not a real answer, but see older thread: Venn/Euler Diagram Of Four Or More Sets. As suggested by Ian you can easily use web tool jvenn (possible to change names as you want; export images; worked for me with 500k lines dataset).


ADD REPLYlink modified 4.6 years ago • written 4.6 years ago by PoGibas4.8k
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