Question: Trinity -denovo transcriptome combined assembly using Illumina and 454 data
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gravatar for malarvizhi.a
4.4 years ago by
malarvizhi.a0 wrote:

How to use trinity to perform denovo transcriptome assembly using illumina and 454 data. Please share your comments.

rna-seq forum • 1.7k views
ADD COMMENTlink modified 4.4 years ago • written 4.4 years ago by malarvizhi.a0

you should expand your question - the simple answer is to read the manual

ADD REPLYlink written 4.4 years ago by Istvan Albert ♦♦ 80k
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gravatar for malarvizhi.a
4.4 years ago by
malarvizhi.a0 wrote:

Hi Istvan Albert,

           Thank your suggestion. I was reading Trinity manual and found following command.

--single <string>   :single reads, one or more (note, if single file contains pairs, can use flag: --run_as_paired )

Once I have tried it. I will share my comments regarding this soon.

ADD COMMENTlink written 4.4 years ago by malarvizhi.a0
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