Question: (Closed) microarray in data
1
gravatar for vigneshnivas09
4.2 years ago by
India
vigneshnivas0910 wrote:

Microarray data in raw values i will find out but i have  one question ?

how to find the samples values identify  in geodataset ?

how to identify the p-values? 

How to find values in samples?

pls help me

gene • 915 views
ADD COMMENTlink modified 4.2 years ago by andrew450 • written 4.2 years ago by vigneshnivas0910
1

How to write complete sentences?

I'm guessing that your post could be rewritten as: "I'm using GEOquery in R to download public datasets. I'm able to retrieve datasets but I'm not sure how to look extract individual samples or values from the resulting object".

For p-values, you need to calculate them.

ADD REPLYlink written 4.2 years ago by Devon Ryan88k

yes sir how to calculate the p-values 

ADD REPLYlink written 4.2 years ago by vigneshnivas0910

That will depend entirely on the type of microarray. There's no single answer to your question. You'd be advised to contact a local bioinformatician for help.

ADD REPLYlink written 4.2 years ago by Devon Ryan88k

Please improve your question substantially, add more detail and improve the language, seek help from a native english speaker.

This seems to be more or less the same question like your other one.

ADD REPLYlink written 4.2 years ago by Michael Dondrup45k

Hello vigneshnivas09!

We believe that this post does not fit the main topic of this site.

Please use complete sentences. It is unclear what is being asked.

For this reason we have closed your question. This allows us to keep the site focused on the topics that the community can help with.

If you disagree please tell us why in a reply below, we'll be happy to talk about it.

Cheers!

ADD REPLYlink written 2.2 years ago by Michael Dondrup45k
0
gravatar for andrew
4.2 years ago by
andrew450
United States
andrew450 wrote:

Not sure if this helps, but iPathwayGuide offers the ability to upload output from GEO2R.

We have a number of in-app videos that explain how do use it.  Below is an example showing how to use GEO2R in connection with iPathwayGuide.  Best of all it's FREE!

https://www.youtube.com/watch?v=nrSAxELqi7Q

 

ADD COMMENTlink written 4.2 years ago by andrew450
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