Finding similar trees toplogy from a thousands of newick trees
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Entering edit mode
9.2 years ago
vicky ▴ 30

Hi All

I have a list of 2000 newick (format) unrooted phylogentic trees of 20 species. I want to find from these 2000 trees, how many topologies they favor and their number of trees associated with each toplogies.

E.g. ((A,B),C); --- 20 trees , ((B,C),A); --- 40 trees and so on.

Is there any program available to do this ?

Thanks

Phylogenetic-tree • 1.8k views
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Entering edit mode
9.2 years ago

You could try Compare2Trees or TOPD/FMTS.

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