I am new to ngs works. Now i am trying bowtie2 for alignment of my reads and i made the index. When i run the bowtie2 align, the following error is coming. I tried the example file and i got the same error.
" Error: Encountered internal Bowtie 2 exception (#1)
Command: /usr/bin/bowtie2-align --wrapper basic-0 -x anv_S -u FN146_S1_L001_R1_001.fastq -s S1r1.sam "
Help me frnds, how can i rectify this error