Question: Bowtie 2 Error
0
sjbharathy • 0 wrote:
Hai all,
I am new to ngs works. Now i am trying bowtie2 for alignment of my reads and i made the index. When i run the bowtie2 align, the following error is coming. I tried the example file and i got the same error.
" Error: Encountered internal Bowtie 2 exception (#1)
Command: /usr/bin/bowtie2-align --wrapper basic-0 -x anv_S -u FN146_S1_L001_R1_001.fastq -s S1r1.sam "
Help me frnds, how can i rectify this error
ADD COMMENT
• link
•
modified 5.8 years ago
by
Biostar ♦♦ 20
•
written
6.0 years ago by
sjbharathy • 0
Can you provide the two calls for indexing and mapping which you used?