Question: Bowtie 2 Error
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sjbharathy • 0 wrote:
Hai all,
I am new to ngs works. Now i am trying bowtie2 for alignment of my reads and i made the index. When i run the bowtie2 align, the following error is coming. I tried the example file and i got the same error.
" Error: Encountered internal Bowtie 2 exception (#1)
Command: /usr/bin/bowtie2-align --wrapper basic-0 -x anv_S -u FN146_S1_L001_R1_001.fastq -s S1r1.sam "
Help me frnds, how can i rectify this error
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modified 4.6 years ago
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Biostar ♦♦ 20
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written
4.7 years ago by
sjbharathy • 0
Can you provide the two calls for indexing and mapping which you used?