I run PhyML software and generated 3 output files as expected. But am in confusion how to generate phylogenetic tree figure from "myseq.phy_phyml_tree.txt file". Looking at the phyml parameters doesnt solve my problem. I would like to generate 'Original PhyMLtree' as shown here http://www.atgc-montpellier.fr/phyml/alrt/. What is the thing I am missing here! any idea?