I'm currently using the RCircos package, but having some trouble with a specific command. Since my labels are too close together and overlapping, I want to use the RCircos.Get.Gene.Label.Locations(genomic.data) function. My data is working with the other commands, but when I try this command the following error message comes up.
> genomic.data <- chrom.data
Error in order(the.chr$Location) : argument 1 is not a vector
Does anyone know how to resolve this issue? My data format is: Chromosome, chromStart, chromEnd, Gene as directed.
Thanks in advance.