get chromosomal location of housekeeping genes
1
0
Entering edit mode
6.1 years ago
koen.vdberge ▴ 30

I am interested in finding the location of housekeeping genes on the human genome, preferably build hg38. Where can I get this?

Thanks

gene • 2.1k views
ADD COMMENT
2
Entering edit mode
6.1 years ago
seta ★ 1.5k

You can use Ensembl Biomart for it, so:

  1. Please go to www.ensembl.org/biomart/
    • Select the 'Ensembl Genes 79' database (the current version of Ensembl)
    • Select the 'Homo sapiens genes' dataset.
  2. Click on 'Filters' in the left panel.
    • Expand the 'GENE' section by clicking on the + box.
    • Select 'ID list limit - HGNC symbol(s)'.
    • Enter the list of HGNC symbols in the text box (either comma separated or as a list).
  3. Click on 'Attributes' in the left panel.
    • Expand the 'GENE' section by clicking on the + box.
    • Deselect 'Ensembl Transcript ID'.
    • Select 'Associated Gene Name', 'Chromosome Name' and 'Band'.
  4. Click the Results button on the toolbar.
    • Select 'View All rows as HTML' or export all results to a file.

Hope it helps you.

ADD COMMENT
0
Entering edit mode

Thanks! Answer approved.

ADD REPLY

Login before adding your answer.

Traffic: 1609 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6