Is there any tool/scripts that are already out there that can parse standard blast.txt output? I can provide an example of my output if that would help?
I am learning bioinformatics and recently run my first major scripts which used blastn and received standard blast.txt output. I need a tool to parse the output to report the following:
- Significant e-value
- Source sequence (my fasta sequence that was my input against the nt database)
- Target species id, name, and etc (the nt sequence my input had an alignment with)
I am familiar with python somewhat and feel that would be my best tool to work on first. I thank you in advance for your assistance and kindly time you spent reading this question.