Forum:ipython notebooks on bioinformatics and genomics
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7.4 years ago
Pappu ★ 2.1k

I am looking for a collection of ipython notebooks for basic bioinformatics, evolutionary and genomics analysis. Please post here if you are aware of any. Thank you.

python Forum • 5.1k views
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Did you try Google? If so, you would have seen at least one resource. You can then change this to a Forum post and add the resources that you have found, and this way, it would benefit the entire community.

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7.4 years ago
tiagoantao ▴ 690

I have developed quite a few:

In terms of scope, the ones related to the book cover a lot of areas.

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7.4 years ago
Lynxoid ▴ 230

Ben Langmead has a bunch from his recent bioinformatics course.

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7.4 years ago
cmdcolin ★ 2.5k

This is a pretty awesome gallery of ipython notebooks from github that span a large range of subjects https://github.com/ipython/ipython/wiki/A-gallery-of-interesting-IPython-Notebooks#mathematics-physics-chemistry-biology

This one is quite impressive and fully dedicated to bioinformatics http://readiab.org/

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7.4 years ago
rtliu ★ 2.2k

Under Lectures on Python Programming for Biologists

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