Question: Draw multiple heatmaps
0
gravatar for anqi.liang
3.8 years ago by
anqi.liang0
United States
anqi.liang0 wrote:

Hi,  

I used the function heatmap.2() to draw heatmaps and I want to put several heatmaps together in one plots. Could you please tell me how can I do that?

 

Thanks a lot

heatmap.2() R • 1.7k views
ADD COMMENTlink modified 3.8 years ago by poisonAlien2.8k • written 3.8 years ago by anqi.liang0
3
gravatar for poisonAlien
3.8 years ago by
poisonAlien2.8k
Asgard
poisonAlien2.8k wrote:

Best option is using ComplexHeatmap

ADD COMMENTlink written 3.8 years ago by poisonAlien2.8k

"Best" is a strong word, but I agree that ComplexHeatmap is pretty nice.

ADD REPLYlink written 3.8 years ago by Sean Davis25k
1
gravatar for Jean-Karim Heriche
3.8 years ago by
EMBL Heidelberg, Germany
Jean-Karim Heriche18k wrote:

It's often easier to generate figure parts (e.g. heatmaps) independently and then assemble them manually into a final figure using another software such as Inkscape or Illustrator.

ADD COMMENTlink written 3.8 years ago by Jean-Karim Heriche18k
1
gravatar for alolex
3.8 years ago by
alolex890
United States
alolex890 wrote:

You cannot do that with heatmap.2() due to the way it lays out the graph.  Try the aheatmap() function from the NMF package.  You should be able to use the layout() command with these heatmaps.

ADD COMMENTlink written 3.8 years ago by alolex890
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