warning in rstudio

Question

[zizigolu]

sorry guys,

I tried to install seqine package in rstudio but it said that:

installing to /usr/people/home/izadi/R/x86_64-redhat-linux-gnu-library/3.2/seqinr/libs

** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'seqinr'
    finding HTML links ...Error in readRDS(f) : error reading from connection
* removing '/usr/people/home/izadi/R/x86_64-redhat-linux-gnu-library/3.2/seqinr'
Warning in install.packages :
  installation of package 'seqinr' had non-zero exit status

The downloaded source packages are in
    '/tmp/RtmpNoIs1C/downloaded_packages'

Do you know what happened please?

[GouthamAtla]

How did you install? install.packages("seqinr") didn't work?

Answer 1

[zorbax]

It's an issue with the directory in which you store you packages, I have come across this 3 solutions if your problem don't solve re-installing "seqinr":

1. Delete your .Rhistory and .RData files in the directory in which you are running R.
2. Try to run an "update.packages()"
3. If those fail, you may have to delete the directory in which you have stored your downloaded packages /tmp/RtmpNoIs1C/downloaded_packages