Hi all,
I'm quite new in bioinformatics. I am working with Illumina data in UPARSE pipeline. I am following Dr Edgar protocol and I managed to reach the dereplication step with all my samples pooled in a single fasta file to use in the -derep_fulllength
command. However this file id massive and the sostware can't deal with it. In windows, it cannot be 100% read, although the Linux server can cope with the reading but then it stops. It comes up this message:
libgomp: Thread creation failed: Resource temporarily unavailable
What can I do? Any suggestions?
Thank you very much!