Tools to find overlapping/common interactions between two networks
3
0
Entering edit mode
6.0 years ago
Naresh D J ▴ 80

Hi,

Is there any tool to find common/overlap interactions between two networks.

Thank you,

Naresh D J

networks overlap • 2.5k views
ADD COMMENT
1
Entering edit mode
6.0 years ago
samuelmiver ▴ 440

I strongly recommend you Cytoscape in order to analyse Networks:

http://www.cytoscape.org/

Once controlled the main and basic functions, the thing you need to do is very well explained here:

visualize overlapping nodes in Cytoscape

ADD COMMENT
1
Entering edit mode
5.9 years ago
abascalfederico ★ 1.2k

If you code interactions in a network in a two-column format (and for each row you place the columns in alphabetical order) then you can just use shell tools like cat, join, unique, sort to answer your question or do multiple other analyses.

 

ADD COMMENT
0
Entering edit mode
ADD COMMENT

Login before adding your answer.

Traffic: 2296 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6