Question: Promoter - Transcription factor binding energy calculator
1
gravatar for rohitrandhawa001
4.9 years ago by
rohitrandhawa00110 wrote:

hi, 

i need some help regarding some online servers or softwares available to find binding energy btwn promoter of the gene (nucleotide sequence) and transcription factor.how much binding energy is there if transcription factor binds to wild type promoter and how much binding energy is there if transcription factor binds to promoter  (nucleotide seq) with some mutations in it....

regrads,

 

rohit randhawa 

snp sequence genome gene • 1.5k views
ADD COMMENTlink modified 4.9 years ago by Asaf8.4k • written 4.9 years ago by rohitrandhawa00110
0
gravatar for Asaf
4.9 years ago by
Asaf8.4k
Israel
Asaf8.4k wrote:

There is a server of Rosetta (Baker lab) for computing the protein-DNA interaction energy for solved structures. However, as they state they only allow mutations on the protein but it might be a good starting point.

DnaInterfaceScanServer

ADD COMMENTlink written 4.9 years ago by Asaf8.4k
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