Question: ncbi gds datasets
2
gravatar for manasa22.reddy
2.8 years ago by
United States
manasa22.reddy40 wrote:

iam a new user of ncbi geo,so iam confused between ncbi gse and gds datasets ,

i want to know the importance of ncbi gds ,can we use this data for analysis,does it represent the complete experiment ??

can anyone tell the difference between ncbi gse and gds ???

ncbi geo forum gse gds • 1.1k views
ADD COMMENTlink modified 2.8 years ago by Sean Davis25k • written 2.8 years ago by manasa22.reddy40

Just out-of-curiosity, how are you planning to access and use the data?

ADD REPLYlink written 2.8 years ago by Sean Davis25k
3
gravatar for Sean Davis
2.8 years ago by
Sean Davis25k
National Institutes of Health, Bethesda, MD
Sean Davis25k wrote:

An NCBI GDS is a (now historical) lightly curated version of datasets available as GSE.  These days, GEO no longer curates data to GDS format, so it is most general to stick to GSE.  Said another way, all data available as a GDS is also available as a GSE, but only a subset (relatively small) of GSEs are available as GDS.

 

ADD COMMENTlink written 2.8 years ago by Sean Davis25k
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