Question: Co-expression of transcripts in HeLa cell
0
gravatar for thejustpark
3.3 years ago by
thejustpark60
United States
thejustpark60 wrote:

Hello all, 

 

I have to do something using co-expression network of transcripts in HeLa cell. 

Since HeLa cell has been widely studied, I think there should be this data out there, 

but can't find one. 

 

Can you please help me to locate this data?

If I have to build this myself, it would take a lot of time, so your feedback, at any level, would be deeply appreciated. 

Thank you guys, 

rna-seq • 831 views
ADD COMMENTlink modified 3.3 years ago by Jean-Karim Heriche18k • written 3.3 years ago by thejustpark60
1
gravatar for Jean-Karim Heriche
3.3 years ago by
EMBL Heidelberg, Germany
Jean-Karim Heriche18k wrote:

You'll probably have to build the network from expression data. Have a look at  ArrayExpress. There's for example this dataset or this one for cell cycle expression profiles.

ADD COMMENTlink written 3.3 years ago by Jean-Karim Heriche18k

Thank you Heriche, 

You are providing good examples to start with!

ADD REPLYlink written 3.3 years ago by thejustpark60
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