For a specific sample, I want to download the sequences that have been classified as phylum Bacteroidetes. This is the command I use:
curl -X GET -H "auth: pgsDxzBeMk287a8EUwinE9Vrk" "http://api.metagenomics.anl.gov/1/annotation/sequence/mgm4444444.4?evalue=10&identity=80&source=RefSeq&type=organism&filter_level=phylum&filter=Bacteroidetes" > Bacteroidetes_sequences
I've repeated it a couple of times. The thing is that for some samples I get significantly varying sizes in the different downloading trials.
Sample01 - Bacteroidetes_sequences - Size 2 MB
Sample01 - Bacteroidetes_sequences - Size 30 MB
Any hint? Thanks in advance. Cheers!