Question: Java api or library to calculate hydrogen bonds of a protein
0
gravatar for m.taheri
4.6 years ago by
m.taheri30
Iran, Islamic Republic Of
m.taheri30 wrote:

Hello every body.

I need a Java api or library for calculating hydrogen bonds of a given pdb file. Even a Web Service that calculates hydrogen bonds like this can be useful, because i need to call it from the program i am writing with Java.

Thanks a lot.

hydrogen bond protein java pdb • 1.1k views
ADD COMMENTlink modified 4.6 years ago by Dan D7.1k • written 4.6 years ago by m.taheri30
0
gravatar for Dan D
4.6 years ago by
Dan D7.1k
Tennessee
Dan D7.1k wrote:

It will take a little bit of additional coding, but BioJava has a robust PDB Reader and plenty of classes for protein composition and structure. 

Classes/Interfaces of interest for this specific application:

Structure

PDBReader

FileParsingParameters

ADD COMMENTlink written 4.6 years ago by Dan D7.1k
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