Question: I have some queries on coverage
gravatar for bioinforesearchquestions
2.3 years ago by
United States
bioinforesearchquestions140 wrote:

Dear all,

I am going to analyze whole genome sequence (WGS) data of Human sample. I need some clarifications on following terminologies.

1) what is coverage and depth?

2) I have seen people use WGS with expected coverage 30X. Why specifically 30X?

3) How to see my WGS coverage information?

​4) Is there any tools to detect the coverage information?

5) Does expected coverage changes for RNAseq and DNASeq?

6) What is the relationship between SNP and coverage?

snp coverage dnaseq rnaseq • 853 views
ADD COMMENTlink written 2.3 years ago by bioinforesearchquestions140

Possible answer for all your questions - What Is The Sequencing 'Depth' ?

ADD REPLYlink modified 2.3 years ago • written 2.3 years ago by venu5.3k

Thanks Venu for the link. I will go through the link


ADD REPLYlink written 2.3 years ago by bioinforesearchquestions140
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 859 users visited in the last hour