hello all! I have only the set of up regulated (1526)and down regulated (1950) gene list of bladder cancer in excel. I want to see the interaction between these genes, Is there any tool or software to do this?
String can output the interactions based on your input.
Dear priyasethu18, you could use netanalyst
It has various options for statistical analysis and finding functional module in your gene list, also you could attribute a weight for each gene in your network
Thank you! i tried using STRING , since my gene list is large the , output is taking long to display.