hi, I have a question?
How i can Build a HMM profile not for nucleotides to aminoacids, only for letters or words?
thanx a lot
hi, I have a question?
How i can Build a HMM profile not for nucleotides to aminoacids, only for letters or words?
thanx a lot
Michael Dondrup thak you for answer
I am using Hmmerscan, but it causes a practical problem , only work whit amino acid or nucleotides, this question is related to bioinformatics because I what to represent another type of elements in the genome, not only (acid or nucleotides) and this elements are more that 24, and i need the complete alphabet to represent this, i look for a program that can generate this and evaluate this profiles in sequence (of the same elements)
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Yes, HMMs can be defined using arbitrary emission symbols and are routinely used in language recognition, but how is this related to bioinformatics then? HMMs are not an invention of bioinformatics.