Question

non coding RNA derived from 3'-UTR

0

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6.5 years ago

jack ▴ 940

Hi,

I'm looking resource/ GTF file which shows the non-coding RNAs dreived from 3'-UTR of coding RNAs. Would someone help me with this ?

RNA-Seq RNA Bioinformatics • 1.4k views

ADD COMMENT • link updated 6.5 years ago by Michael Dondrup 52k • written 6.5 years ago by jack ▴ 940

score 1 · Answer 1 · 2016-04-06

1

Entering edit mode

6.5 years ago

Michael Dondrup 52k

I am not sure I understand your question correctly, are you looking for an example file with annotated three_prime_utr as sequence type? Most or All Ensembl GTF and GFF3 files have that feature. Download Examples from Ensembl metazoa ftp server.

ADD COMMENT • link 6.5 years ago by Michael Dondrup 52k