Hi all, i am perform local alignment with bowtie2. the output is: -
17267759 reads; of these:
17267759 (100.00%) were unpaired; of these:
129533 (0.75%) aligned 0 times
8205103 (42.52%) aligned exactly 1 time
8933123(51.73%) aligned >1 times
99.25% overall alignment rate
i don't know it is right or not if it is right then how to analyse this, please help me.