Question: Genelist Perseus Format
gravatar for kpmmolloy
4.1 years ago by
kpmmolloy0 wrote:

Hi guys,

I'm doing a bit a proteomics using Perseus. I want to make a fresh txt file of a new genelist in the same format that is supplied with the Perseus software for an organism (S. maltophilia, K279a) different to the ones provides (Human, C. elegans etc.).

The txt files supplied have the following column format:

ENSG ENST ENSP Uniprot Gene name Protein name

Is there a simple way to go about doing this?

Best wishes,


gene • 1.1k views
ADD COMMENTlink written 4.1 years ago by kpmmolloy0

Ensemble biomart could generate this list for all genes and then the needed can be parsed out.

ADD REPLYlink written 4.1 years ago by microfuge1.8k

Find BioMart tutorials on this page in case you are new to the tool.

ADD REPLYlink written 4.1 years ago by genomax89k
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