Question: S4Vectors installation error
1
gravatar for niutster
3.5 years ago by
niutster90
niutster90 wrote:

Hi,

I am trying to install S4vectors package in R (on server) bur I get this error:

eval_utils.c:31:5: note: use option -std=c99, -std=gnu99, -std=c11 or -std=gnu11 to compile your code make: * [eval_utils.o] Error 1 ERROR: compilation failed for package 'S4Vectors' * removing '/home/barjaste/R/x86_64-pc-linux-gnu-library/3.2/S4Vectors'

Thanks

R • 1.9k views
ADD COMMENTlink modified 3.3 years ago by Biostar ♦♦ 20 • written 3.5 years ago by niutster90

Can you provide some more information? Which commands did you use for the installation, what is your R version, which errors/messages were produced beside this one?

ADD REPLYlink written 3.5 years ago by WouterDeCoster42k

The command: install.packages("/home/barjaste/S4Vectors_0.6.3.tar.gz",repos=NULL,source="type") R version is 3.2.3

ADD REPLYlink written 3.4 years ago by niutster90

S4Vectors is a Bioconductor package. You should follow the instructions about how to install Bioconductor packages here. Basically, in the R prompt:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite()
ADD REPLYlink written 3.3 years ago by ddiez1.8k
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