Question: Embedding NCBI standalone Blast or SequenceServer in a Website
1
gravatar for kabir.deb0353
3.7 years ago by
kabir.deb035310 wrote:

I'm planning to make an online Database on sequence data which can be accessible through BLAST (NCBI standalone blast or SequenceServer) search tool where user can choose one or more databases (options defined by me). Users also can opt other probable blast parameters like E value cutoff, identity cutoff, coverage cutoff etc. (My website domain is hosted in Arvixe) My question is that where can I get I suitable guide for doing that, as my background in biology and I'm beginner in bioinformatics?

ADD COMMENTlink modified 11 months ago by Yannick Wurm2.3k • written 3.7 years ago by kabir.deb035310

Guess that would depend on the programming language of your choice. In case its perl, CGI is a good start http://perldoc.perl.org/CGI.html . Many good tutorials are available in the web for the perl CGI module.

ADD REPLYlink written 3.7 years ago by microfuge1.6k
2
gravatar for Yannick Wurm
11 months ago by
Yannick Wurm2.3k
Queen Mary University London
Yannick Wurm2.3k wrote:

Apologies for the slow response - yes it is easy to integrate sequencserver as part of a bigger websites. (e.g. via ngnix). This is documented at https://sequenceserver.com/ under advanced configuration

ADD COMMENTlink written 11 months ago by Yannick Wurm2.3k
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