A question about browser based TCGA expression data (https://tools.stamlab.org/tcga/?gene=MYB) . It is a follow up question previously discussed @ C: One gene association with cancer types 1. It takes level 3 TCGA data or some other level. 2. The figure shows TPM, I was wondering how the RNA seq data has been finally analyzed in the backend. Is it RSEM or RPKM level analysis 3. Raw CSV will output raw read count data or it has been preprocessed in some way.
Question: RNAseq TCGA expresssion
2.4 years ago by
kanwarjag • 930
kanwarjag • 930 wrote:
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