Question: seattle seq annotation tool
0
gravatar for marwa.cs91
3.6 years ago by
marwa.cs9130
Egypt
marwa.cs9130 wrote:

Hello all, I have a list of SNPs like(rs429358,rs2007332 and ......). How can I use seattle seq tool for SNPs annotation)?

thanks in advance

seattle seq snp annotation • 1.1k views
ADD COMMENTlink modified 3.6 years ago • written 3.6 years ago by marwa.cs9130
2
gravatar for WouterDeCoster
3.6 years ago by
Belgium
WouterDeCoster43k wrote:

I assume you have read this . If so, you'll know that your SNP list cannot be directly used as input for the tool. So essentially this means that your question actually is: how do I convert SNP IDs from dbSNP to an input file that I can use in seattle seq tool? You can fill in your SNPs here to retrieve in batch mode information in different formats.

ADD COMMENTlink written 3.6 years ago by WouterDeCoster43k
0
gravatar for marwa.cs91
3.6 years ago by
marwa.cs9130
Egypt
marwa.cs9130 wrote:

Thanks WouterDeCoster for your help

ADD COMMENTlink written 3.6 years ago by marwa.cs9130

You are very welcome. Please use ADD COMMENT to reply to earlier posts, as such this thread remains logically structured and easy to follow. If my post resolved your question, please mark the answer as accepted.

ADD REPLYlink written 3.6 years ago by WouterDeCoster43k
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