Hello everyone, (I am not native in English)
I want to parse XML local blast result (transcripts against NCBI nr) to see the name of the transcripts that have shown any hits (if the name of the transcripts and the name of the protein could be retrieve, it is better).
it seems that Biophython NCBIXML is designed for this work.
Would you please help me for a simple script to run NCBIXML on my output.xml ?
Thank you in advance
1- I have checked some related posts, but could not figure it out.
2- If there is any other software or package for this "parsing", mention it, please.