I am looking for a software for HLA typing of whole genes (but exomes and genomes are also ok) that can be used with the commercial license. I also would like it to be on Ubuntu (launching in terminal)
I have found programs like HLAminer, PHLAT, ATHLATES but all of them are created for the purpose of only academic usage.
The only one I found is HLAVBSeq - promissing.
Do you know any other tool?