Question: How can I get gene annotations for hg38 in R?
gravatar for Tori
2.2 years ago by
Tori80 wrote:

How can I get table like following in R for hg38?

RefseqID    Symbol  Description EntrezID
NM_000014   A2M alpha-2-macroglobulin   2
NM_000015   NAT2    N-acetyltransferase 2 (arylamine N-acetyltransferase)   10
NM_000016   ACADM   acyl-CoA dehydrogenase, C-4 to C-12 straight chain  34
NM_000017   ACADS   acyl-CoA dehydrogenase, C-2 to C-3 short chain  35
NM_000018   ACADVL  acyl-CoA dehydrogenase, very long chain 37
R hg38 annotation • 834 views
ADD COMMENTlink modified 2.2 years ago by WouterDeCoster36k • written 2.2 years ago by Tori80
gravatar for WouterDeCoster
2.2 years ago by
WouterDeCoster36k wrote:

I usually use this package: Alternatively, biomaRt would be your friend.

ADD COMMENTlink written 2.2 years ago by WouterDeCoster36k
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 751 users visited in the last hour