Hi, my question is basically the same as : GC-BIAS correction for BAM file
I need a software that will take in bam/fastq and output a GC (and other) -bias corrected bam/fastq. The issue with computeGCBias/correctGCBias is that one of their dependencies requires centOS7 to run but I only have access to centOS6.
Are there any other software that corrects for GC bias and outputs a bam/fastq file? I looked at several software like salmon and some R packages but they don't seem to have an option to output bam/fastq.
Thanks for the assistance