Google TCGA data portal
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7.3 years ago
1769mkc ★ 1.2k

I am trying to use Google TCGA data portal since it has information about patient data along with expression values .But I guess it uses SQL to to put query and get the data .I have very less knowledge about sql can anyone check the link and let me know how can i pull down data from it .

Here is the link

googlegenomics.readthedocs.io/en/latest/use_cases/discover_public_data/isb_cgc_data.html
R • 2.4k views
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I think google just reuse data from other sources. Maybe you could find different methods of access or downloading the data if you check the places where the data comes from.

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How's the R tag relevant here? Also, SQL is quite interesting to learn as a language and a way of thinking, so I think this is a good opportunity for you to start :)

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sorry for the tag I dont know nothing else was coming but I used their API which I can use it in R but that is not giving me much info except the RPKM values etc, and yes I have started learning basic SQL hope I can learn enough to pull down data.

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