I have a list of snps in .txt format. only 10 snps to be exact, that appear on a certain region on chromosome 7. In my text file, I have the position of the SNP and the values I need, I just have to create the
zoomed-in effect like in the picture below.
I 'm using GViz, to plot the Ideogram of the chromosome, and then zoom in to the specific region in order to list the SNPs and the info I have from a study next to them.
I have managed to recreate the ideogram of the chromosome and I'm struggling with the SNPs. Can anyone help?