Question: DNA-seq Breast Cancer dataset
gravatar for pingEde
2.7 years ago by
European Union
pingEde30 wrote:


I am trying to develop a pipeline for my breast cancer data (I have DNA-seq data from normal/tumor samples) and I would like to test it with another breast cancer dataset that also include the information of the validate variants, in order to see how many FP/FN/TN/TP I will find.

Is such dataset available?

Thank you in advance

Best regards

breast cancer pipeline dna-seq • 1.0k views
ADD COMMENTlink written 2.7 years ago by pingEde30

this paper has used a gold standard for validation of GRNs

DOI: 10.1186/gm340

they used as their reference network

ADD REPLYlink modified 2.7 years ago • written 2.7 years ago by Angel3.5k

thank you for your answer and your help, but I need DNA-seq data, not Gene expression...

ADD REPLYlink written 2.6 years ago by pingEde30
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 2090 users visited in the last hour