Question: DNA-seq Breast Cancer dataset
gravatar for pingEde
2.2 years ago by
European Union
pingEde30 wrote:


I am trying to develop a pipeline for my breast cancer data (I have DNA-seq data from normal/tumor samples) and I would like to test it with another breast cancer dataset that also include the information of the validate variants, in order to see how many FP/FN/TN/TP I will find.

Is such dataset available?

Thank you in advance

Best regards

ADD COMMENTlink written 2.2 years ago by pingEde30

this paper has used a gold standard for validation of GRNs

DOI: 10.1186/gm340

they used as their reference network

ADD REPLYlink modified 2.2 years ago • written 2.2 years ago by F3.4k

thank you for your answer and your help, but I need DNA-seq data, not Gene expression...

ADD REPLYlink written 2.2 years ago by pingEde30
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