I am currently working with HMMER3 and created a bunch of profiles which I now want to use for another project.
The problem is, that I want to write the code for my project in R and can't find a method to load the profiles. Does anybody know a method or package to get the model out of the hmmbuild profile and store them in a way which can be used productively?
If there is no method available in R I could also live with Python, but I would prefer R.
Many thanks in advance.