Question: Convert blastn to gff3
0
gravatar for kspata
18 months ago by
kspata40
kspata40 wrote:

Hi I have the output of blastn in a tabular format. I need to convert this into a gff3 format. How to write a parser for this or how can i do it without parser?

blastn blastp gff3 • 823 views
ADD COMMENTlink written 18 months ago by kspata40
3

maybe you can find something on this post : How To Convert Blast Results To Gff

ADD REPLYlink modified 18 months ago • written 18 months ago by guillaume.rbt450

or how can i do it without parser?

Why do you specifically not want a parser?

ADD REPLYlink written 18 months ago by jrj.healey7.6k

Hi I am open to use a parser as well.. the question is just how to write it?

ADD REPLYlink modified 18 months ago • written 18 months ago by kspata40
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