Question: Convert blastn to gff3
0
gravatar for kspata
21 months ago by
kspata40
kspata40 wrote:

Hi I have the output of blastn in a tabular format. I need to convert this into a gff3 format. How to write a parser for this or how can i do it without parser?

blastn blastp gff3 • 954 views
ADD COMMENTlink written 21 months ago by kspata40
3

maybe you can find something on this post : How To Convert Blast Results To Gff

ADD REPLYlink modified 21 months ago • written 21 months ago by guillaume.rbt490

or how can i do it without parser?

Why do you specifically not want a parser?

ADD REPLYlink written 21 months ago by jrj.healey9.8k

Hi I am open to use a parser as well.. the question is just how to write it?

ADD REPLYlink modified 21 months ago • written 21 months ago by kspata40
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 511 users visited in the last hour