Is there a function similar with qblast to blast the SeqIO.parse object? Biopython Blastn
0
0
Entering edit mode
7.0 years ago
bxia ▴ 180

Is there a way to blast multiple sequences with biopython qblast at same time instead of just using for loop the SeqIO.parse resutl?

Thanks,

blast • 1.4k views
ADD COMMENT
0
Entering edit mode

Please be more specific, you want to run blast from Python? Like Bio::Tools::Run in BioPerl (I think that does not exist, unfortunately Biopython is not nearly as complete as BioPerl, maybe you like to switch :) ?

ADD REPLY

Login before adding your answer.

Traffic: 1999 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6