Design matrix for maSigPro library
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6.8 years ago
1769mkc ★ 1.2k

edesign matrix fro masig pro

I would like to create a design matrix as such i made it but it seems the rows which should contain my time-point is being read as column in the matrix .Any suggestion how to create that matrix.I m making a csv file and read it in R but it seems its not the right way..

RNA-Seq R • 1.9k views
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The replicate column is wrong too. Shouldn't it be 1,2,3,1,2,3...instead of 1,1,1,2,2,2...?

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i dont know its in the masigpro library data...inbuit data.

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6.8 years ago
theobroma22 ★ 1.2k

You can input the file into R like

x = as.matrix( data.frame( file, ..., row.names=1, ... )

In the R command line you can write

?data.frame

for more detail.

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