Question: Show warnings and errors in snpeff summary
gravatar for misbahabas
3.6 years ago by
misbahabas60 wrote:

Asslamu Alikum

I was generated vcf file from bam and fasta file using gatk tool but when it run on snpeff it shows some warnings and errors in the summary page,

SnpEff version SnpEff 4.3p (build 2017-06-06 09:55), by Pablo Cingolani

**Warnings 1,097,322

Errors 224,360**

Is it effect on results and how to solve it?

If any one have a idea about it please help me

snp tool snpeff vcf • 1.1k views
ADD COMMENTlink written 3.6 years ago by misbahabas60
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1569 users visited in the last hour