Get sequences from oligonucleotide probe ids
2
0
Entering edit mode
6.7 years ago
The Last Word ▴ 230

Hi,

I have a bunch of oligonucleotide probe ids (please click on link). Now I need to retrieve the sequences for these probes to the new honey bee gene-set. Could you please suggest a method I could use to retrieve the sequences for these probes because I can't seem to find it anywhere.

sequence • 1.5k views
ADD COMMENT
3
Entering edit mode
6.7 years ago
GenoMax 141k

Sequences of the oligo probes are available in this file from GEO.

ADD COMMENT
1
Entering edit mode
6.7 years ago
Niek De Klein ★ 2.6k

The second column is an NCBI nucleotide ID, you can search the nucleotide database for the sequence. For example: https://www.ncbi.nlm.nih.gov/gquery/?term=XM_001122142.1

ADD COMMENT

Login before adding your answer.

Traffic: 1592 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6