where to download ERCC RNA spike ins fasta and gff file?
2
1
Entering edit mode
4.7 years ago
Javad ▴ 140

Hi everyone,

Could you please tell me where I can find the annotation and fasta file related to ERCC 92 spike ins. The Thermo fisher website only gives the fasta file. Is there any other link that I can download compatible fasta and gff files?

Thanks a lot

RNA-Seq • 4.9k views
ADD COMMENT
2
Entering edit mode
4.7 years ago

There is no GFF file for the spike-ins, if you need one then just add one line per spike-in to whatever GFF/GTF file you're using.

ADD COMMENT
8
Entering edit mode
3.5 years ago
Chao Tang ▴ 80

Hi Javad, You can download this files from here: https://assets.thermofisher.com/TFS-Assets/LSG/manuals/ERCC92.zip

ADD COMMENT

Login before adding your answer.

Traffic: 1914 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6