RIGER extension in GENE-E
1
0
Entering edit mode
4.8 years ago

Hello all,

I am trying to make RIGER work through GENE-E. Earlier I tried adding the RIGER extension to home directory as instructed at https://software.broadinstitute.org/GENE-E/extensions.html. But could not make it work.

Has anyone faced any issue similar to above while using RIGER through GENE-E. Are there any other alternative tools for RIGER analysis? Please let me know. Thank you

Regards, Ashwani

sequencing next-gen crispr Gene Ranking • 3.0k views
ADD COMMENT
0
Entering edit mode

What means "could not make it work"? What were the error messages? What was the command you used?

ADD REPLY
0
Entering edit mode

Hi,

This is what I did

1) Download the RIGER.jar file

2) Put it in the extensions directory. (/home/GENE-E/extensions)

3) Launched the GENE-E

After launching GENE-E (GUI), where should I navigate to find the RIGER option? I am not getting any error message. I am having difficulty in navigating RIGER extension. Please help.

Thank you Ashwani

ADD REPLY
0
Entering edit mode
3.8 years ago
natallah ▴ 10

After launching GENE-E, it will be under the "Tools" tab

ADD COMMENT

Login before adding your answer.

Traffic: 2029 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6