Entering edit mode
7.0 years ago
saj98
▴
140
Hello everyone
I am trying to install cufflinks using the following
/Downloads/cufflinks-2.2.1.Linux_x86_64$ configure --prefix=/usr/bin/to/cufflinks/install --with-boost=/usr/bin/to/boo
it run well then it gave me the following error
FAILED. You must supply an HTSlib in order to build samtools successfully.
Any help or suggestion.
Thanks for your time
Does the samtools directory contain the HTSlib? Where did you download samtools from?
I install it from the source https://github.com/samtools/samtools/blob/master/INSTALL
Recompile it from the tar.bz2 archive, which includes HTSlib. The other source code releases are incomplete: