Question: what is the difference between snps files in UCSC download
0
gravatar for mms140130
21 months ago by
mms14013060
mms14013060 wrote:

I 'm trying to find the snps within 1mb or 1kb from the gene

there are several snps file in http://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/

like snp 142,snp 144, snp 146, snp 147 and so on

which one shall I choose? my gene data is hg 19

thanks

snp • 623 views
ADD COMMENTlink modified 21 months ago • written 21 months ago by mms14013060

You may find it easier to use the UCSC Table browser (or BioMart from Ensembl) to download the information you need.

ADD REPLYlink modified 21 months ago • written 21 months ago by genomax69k
2
gravatar for genomax
21 months ago by
genomax69k
United States
genomax69k wrote:

Those numbers are dbSNP build references (https://www.ncbi.nlm.nih.gov/SNP/buildhistory.cgi ).

ADD COMMENTlink written 21 months ago by genomax69k
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